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1

The gut microbiota and its relationship to diet and obesity

Clarke, Siobhan F., Murphy, Eileen F., Nilaweera, Kanishka, Ross, Paul R., Shanahan, Fergus, O’Toole, Paul W., Cotter, Paul D.

Journal:

Year:

2012

Language:

english

File:

PDF, 2.04 MB

english, 2012

2

Exercise and the microbiota

O’Sullivan, Orla, Cronin, Owen, Clarke, Siobhan F, Murphy, Eileen F, Molloy, Micheal G, Shanahan, Fergus, Cotter, Paul D

Journal:

Year:

2015

Language:

english

File:

PDF, 333 KB

english, 2015

3

Ring schlieren: Description and interpretation of field relations in the Halifax Pluton, South Mountain Batholith, Nova Scotia

Clarke, D. Barrie, Grujic, Djordje, McCuish, Krista L., Sykes, James C.P., Tweedale, Fergus M.

Journal:

Journal of Structural Geology

Year:

2013

Language:

english

File:

PDF, 3.72 MB

english, 2013

4

Quinuclidine Inhibitors of 2,3-Oxidosqualene Cyclase-Lanosterol Synthase: Optimization from Lipid Profiles 1

Brown, George R., Hollinshead, David M., Stokes, Elaine S. E., Clarke, David S., Eakin, M. Allan, Foubister, Alan J., Glossop, Steven C., Griffiths, David, Johnson, Michael C., McTaggart, Fergus, Mirr

Journal:

Journal of Medicinal Chemistry

Year:

1999

Language:

english

File:

PDF, 132 KB

english, 1999

5

Microbes & neurodevelopment – Absence of microbiota during early life increases activity-related transcriptional pathways in the amygdala

Stilling, Roman M., Ryan, Feargal J., Hoban, Alan E., Shanahan, Fergus, Clarke, Gerard, Claesson, Marcus J., Dinan, Timothy G., Cryan, John F.

Journal:

Brain, Behavior, and Immunity

Year:

2015

Language:

english

File:

PDF, 1.53 MB

english, 2015

6

Microbial regulation of hippocampal miRNA expression: Implications for transcription of kynurenine pathway enzymes

Moloney, Gerard M., O’Leary, Olivia F., Salvo-Romero, Eloisa, Desbonnet, Lieve, Shanahan, Fergus, Dinan, Timothy G., Clarke, Gerard, Cryan, John F.

Journal:

Behavioural Brain Research

Year:

2017

Language:

english

File:

PDF, 620 KB

english, 2017

7

Microbial regulation of microRNA expression in the amygdala and prefrontal cortex

Hoban, Alan E., Stilling, Roman M., M. Moloney, Gerard, Moloney, Rachel D., Shanahan, Fergus, Dinan, Timothy G., Cryan, John F., Clarke, Gerard

Journal:

Year:

2017

Language:

english

File:

PDF, 1.97 MB

english, 2017

8

Balancing ACT: evaluating the effectiveness of psychoeducation and Acceptance and Commitment Therapy (ACT) groups for people with bipolar disorder: study protocol for pilot randomised controlled trial

O’Donoghue, Emma, Clark, Abigail, Richardson, Matthew, Hodsoll, John, Nandha, Sunil, Morris, Eric, Kane, Fergus, O’Keeffe, Deirdre, Butler, Lucy, Jolley, Suzanne

Journal:

Year:

2018

Language:

english

File:

PDF, 684 KB

english, 2018

9

Host Microbiota Regulates Central Nervous System Serotonin Receptor 2C Editing in Rodents

van de Wouw, Marcel, Stilling, Roman M, Peterson, Veronica L, Ryan, Feargal J, Hoban, Alan E, Shanahan, Fergus, Clarke, Gerard, Claesson, Marcus J, Dinan, Timothy G, Cryan, John F, Schellekens, Harrie

Journal:

ACS Chemical Neuroscience

Year:

2019

Language:

english

File:

PDF, 1.21 MB

english, 2019

10

Use of high frequency jet ventilation as a refinement for imaging macaques with respiratory disease

Sharpe, Sally A, Scott, Shaun, Taylor, Irene, Skinner, Oliver, Clark, Simon O, Smyth, Donna, McIntyre, Anthony, Gleeson, Fergus V, Dennis, Mike J

Journal:

Laboratory Animals

Year:

2020

File:

PDF, 465 KB

2020

11

Degradation of the extracellular matrix components by bacterial-derived metalloproteases: Implications for inflammatory bowel diseases

Mihaela Pruteanu, Niall P. Hyland, David J. Clarke, Barry Kiely, Fergus Shanahan

Journal:

Inflammatory Bowel Diseases

Year:

2011

Language:

english

File:

PDF, 1.21 MB

english, 2011

12

Book reviews

Brian Marsh, Pauline Whyte, David McAvinchey, Tom Clarke, John D. Sheehan, David T. Croke, Peter A. Daly, Fergus Shanahan

Journal:

Irish Journal of Medical Science

Year:

1997

Language:

english

File:

PDF, 390 KB

english, 1997

13

Marked increase in type 1 diabetes mellitus incidence in children aged 0–14 yr in Victoria, Australia, from 1999 to 2002

Jia W Chong, Maria E Craig, Fergus J Cameron, Caroline F Clarke, Christine P Rodda, Susan M Donath, George A Werther

Journal:

Pediatric Diabetes

Year:

2007

Language:

english

File:

PDF, 127 KB

english, 2007

14

Doing interdisciplinarity: motivation and collaboration in research for sustainable agriculture in the UK

Frances Harris, Fergus Lyon, Sarah Clarke

Journal:

Year:

2009

Language:

english

File:

PDF, 120 KB

english, 2009

15

8: Prevalence of Pulmonary Hypertension in Patients With High Fistula Flow Rates

R. Agarwala, D. Da-Rocha, S. Mohan, H. Anderson, A. Clarke, I. Fergus, V. Pogue, J.T. Cheng

Journal:

American Journal of Kidney Diseases

Year:

2010

Language:

english

File:

PDF, 87 KB

english, 2010

16

Enhanced Cholinergic-Mediated Increase in the Pro-Inflammatory Cytokine IL-6 in Irritable Bowel Syndrome: Role of Muscarinic Receptors

Dinan, Timothy G., Clarke, Gerard, Quigley, Eamonn M. M., Scott, Lucinda V., Shanahan, Fergus, Cryan, John, Cooney, John, Keeling, P. W. N.

Journal:

American Journal of Gastroenterology

Year:

2008

Language:

english

File:

PDF, 141 KB

english, 2008

17

Micrometastases in esophagogastric cancer: High detection rate in resected rib segments

Gerald C. O'Sullivan*, Dyan Sheehan*, ‡, Andrew Clarke§, Robert Stuart§, Jacqui Kelly*, ‡, M.David Kiely*, Tom Walsh∥, J.Kevin Collins‡, Fergus Shanahan‡

Journal:

Gastroenterology

Year:

1999

Language:

english

File:

PDF, 219 KB

english, 1999

18

Developmental regulation of circulating insulin-like growth factor-binding proteins in normal pregnancies and in pre-eclampsia

Lewitt, Moira S., Scott, Fergus P., Clarke, Nicole M., Baxter, Robert C.

Journal:

Progress in Growth Factor Research

Year:

1995

Language:

english

File:

PDF, 361 KB

english, 1995

19

1058 Tryptophan Catabolism in Irritable Bowel Syndrome: Relationship to Cytokines, Severity and Psychiatric Co-Morbidity

Peter Fitzgerald, Gerard Clarke, Paul Scully, John F. Cryan, Fergus Shanahan, Eamonn M. Quigley, Eugene Cassidy, Timothy G. Dinan

Journal:

Gastroenterology

Year:

2008

Language:

english

File:

PDF, 59 KB

english, 2008

20

965 The Brain-Gut-Microbiome Axis: Gender and Region-Specific Effects of the Microbiome on Central Neurotransmitter and Neurotrophin Levels

Paul Scully, Gerard Clarke, Sue Grenham, Patrick Fitzgerald, Cliona M. O'Mahony, Declan P. McKernan, Monica Tramullas, Fergus Shanahan, Timothy G. Dinan, John F. Cryan

Journal:

Gastroenterology

Year:

2010

Language:

english

File:

PDF, 53 KB

english, 2010

21

Synthesis and Activity of a Novel Series of 3-Biarylquinuclidine Squalene Synthase Inhibitors 1

Brown, George R., Clarke, David S., Foubister, Alan J., Freeman, Susan, Harrison, Peter J., Johnson, Michael C., Mallion, Keith B., McCormick, John, McTaggart, Fergus, Reid, Alan C., Smith, Graham J.,

Journal:

Journal of Medicinal Chemistry

Year:

1996

Language:

english

File:

PDF, 363 KB

english, 1996

22

Su1992 Regulation of Serotonergic Neurotransmission and Behaviour by the Brain-Gut-Microbiome Axis

Clarke, Gerard, Grenham, Sue, Fitzgerald, Patrick, Moloney, Rachel D., Shanahan, Fergus, Dinan, Timothy G., Cryan, John F.

Journal:

Gastroenterology

Year:

2012

Language:

english

File:

PDF, 95 KB

english, 2012

23

409 The Colonic Adherent-Invasive Escherichia coli Strain HM605 Induces Anti-Apoptotic Responses in Intestinal Epithelial Cells, Reduces Barrier Integrity and Worsens Experimental Colitis

Darby, Trevor, Smith, Emma, Quinlan, Aoife, Hurley, Grainne, Clarke, David, Shanahan, Fergus, Nally, Kenneth, Melgar, Silvia

Journal:

Gastroenterology

Year:

2014

Language:

english

File:

PDF, 66 KB

english, 2014

24

273 High Fat Feeding Alters Gut Microbiota and Protects Mice From Colitis and Colitis-Associated Colorectal Cancer

O'Mahony, Caitlin, Clarke, Siobhan F., Hurley, Grainne, O'Sullivan, Orla, Gavin, Aisling M., Quinlan, Aoife, Houston, Aileen, Mahmoud, Amr, Bennett, Michael, Cotter, Paul D., Shanahan, Fergus, Melgar,

Journal:

Gastroenterology

Year:

2014

Language:

english

File:

PDF, 49 KB

english, 2014

25

Su2111 A Prospective Assessment of Cognitive Performance in Irritable Bowel Syndrome Reveals Persistent Visuospatial Memory Deficits

Kennedy, Paul J., Clarke, Gerard, Allen, Andrew P., O'Neill, Ann, Groeger, John A., Quigley, Eamonn M., Shanahan, Fergus, Cryan, John F., Dinan, Timothy G.

Journal:

Gastroenterology

Year:

2013

Language:

english

File:

PDF, 282 KB

english, 2013

26

Su1966 An Assessment of Cognitive Function in Irritable Bowel Syndrome (IBS): Are Deficits in Visuo-Spatial Memory Stress-Related and Mediated by Tryptophan Metabolism Along the Kynurenine Pathway?

Kennedy, Paul J., Clarke, Gerard, O'Neill, Ann, Groeger, John A., Quigley, Eamonn M., Shanahan, Fergus, Cryan, John F., Dinan, Timothy G.

Journal:

Gastroenterology

Year:

2012

Language:

english

File:

PDF, 246 KB

english, 2012

27

Tu1843 Deficiency in ATG16L1 Increases the Ability of the Adherent-Invasive Escherichia coli (HM605) to Replicate in and Reduce Barrier Integrity of Intestinal Epithelial Cells

Darby, Trevor, Clarke, David, Nally, Kenneth, Shanahan, Fergus, Melgar, Silvia

Journal:

Gastroenterology

Year:

2012

Language:

english

File:

PDF, 72 KB

english, 2012

28

T1807 Bacterial Proteolytic Profile in Inflammatory Bowel Diseases

Pruteanu, Mihaela, Hyland, Niall P., Clarke, David, Kiely, Barry, Shanahan, Fergus

Journal:

Gastroenterology

Year:

2010

Language:

english

File:

PDF, 54 KB

english, 2010

29

Forthcoming issues

Pruteanu, Mihaela, Hyland, Niall P., Clarke, David, Kiely, Barry, Shanahan, Fergus

Journal:

Medical Clinics of North America

Year:

2010

File:

PDF, 21 KB

2010

30

CHARING-CROSS HOSPITAL.

Pruteanu, Mihaela, Hyland, Niall P., Clarke, David, Kiely, Barry, Shanahan, Fergus

Journal:

Year:

1865

Language:

english

File:

PDF, 203 KB

english, 1865

31

Phantom limb pain after amputation in diabetic patients does not differ from that after amputation in nondiabetic patients

Clark, Roger L., Bowling, Frank L., Jepson, Fergus, Rajbhandari, Satyan

Journal:

Year:

2013

Language:

english

File:

PDF, 102 KB

english, 2013

32

A Novel Series of 4-Piperidinopyridine and 4-Piperidinopyrimidine Inhibitors of 2,3-Oxidosqualene Cyclase−Lanosterol Synthase

Brown, George R., Hollinshead, David M., Stokes, Elaine S. E., Waterson, David, Clarke, David S., Foubister, Alan J., Glossop, Steven C., McTaggart, Fergus, Mirrlees, Donald J., Smith, Graham J., Wood

Journal:

Journal of Medicinal Chemistry

Year:

2000

Language:

english

File:

PDF, 112 KB

english, 2000

33

7. CORRESPONDENCE

FORD, EDWARD B., BRODRICK, L., PLOWES, DARREL, PLOWES, DARREL, BERRY, G. F., GIBSON, P., GIBSON, P., CLARK, GOWAN C., HALE, P. E., BEVEN, G., WRIGHT, F. B., WARREN SMITH, E. W., RENNIE, FERGUS, ROBERT

Journal:

Ostrich / Journal of African Ornithology

Year:

1945

Language:

english

File:

PDF, 609 KB

english, 1945

34

Adult Hippocampal Neurogenesis Is Regulated by the Microbiome

Ogbonnaya, Ebere S., Clarke, Gerard, Shanahan, Fergus, Dinan, Timothy G., Cryan, John F., O’Leary, Olivia F.

Journal:

Biological Psychiatry

Year:

2015

Language:

english

File:

PDF, 637 KB

english, 2015

35

Enantiomeric Conformation Controls Rate and Yield of Photoinduced Electron Transfer in DNA Sensitized by Ru(II) Dipyridophenazine Complexes

Keane, Páraic M., Poynton, Fergus E., Hall, James P., Clark, Ian P., Sazanovich, Igor V., Towrie, Michael, Gunnlaugsson, Thorfinnur, Quinn, Susan J., Cardin, Christine J., Kelly, John M.

Journal:

The Journal of Physical Chemistry Letters

Year:

2015

Language:

english

File:

PDF, 2.06 MB

english, 2015

36

Antimicrobials

Murphy, Eileen F., Clarke, Siobhan F., Marques, Tatiana M., Hill, Colin, Stanton, Catherine, Ross, R. Paul, O’Doherty, Robert M., Shanahan, Fergus, Cotter, Paul D.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.12 MB

english, 2013

37

Enantio- and Diastereoselective Hydrogenation of a Fluorinated Diketone

Clarke, Matthew, France, Marcia, Knight, Fergus, Frew, Jamie, Roff, Geoffrey

Journal:

Year:

2007

Language:

english

File:

PDF, 53 KB

english, 2007

38

Route of delivery to the airway influences the distribution of pulmonary disease but not the outcome of Mycobacterium tuberculosis infection in rhesus macaques

Sibley, Laura, Dennis, Mike, Sarfas, Charlotte, White, Andrew, Clark, Simon, Gleeson, Fergus, McIntyre, Anthony, Rayner, Emma, Pearson, Geoffrey, Williams, Ann, Marsh, Philip, Sharpe, Sally

Journal:

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

39

Picosecond pulsed laser deposition of metal-oxide sensing layers with controllable porosity for gas sensor applications

Kekkonen, Ville, Chaudhuri, Saumyadip, Clarke, Fergus, Kaisto, Juho, Liimatainen, Jari, Pandian, Santhosh Kumar, Piirto, Jarkko, Siltanen, Mikael, Zolotukhin, Aleksey

Journal:

Applied Physics A: Materials Science & Processing

Year:

2016

Language:

english

File:

PDF, 3.44 MB

english, 2016

40

Ultra low dose aerosol challenge with Mycobacterium tuberculosis leads to divergent outcomes in rhesus and cynomolgus macaques

Sharpe, Sally, White, Andrew, Gleeson, Fergus, McIntyre, Anthony, Smyth, Donna, Clark, Simon, Sarfas, Charlotte, Laddy, Dominick, Rayner, Emma, Hall, Graham, Williams, Ann, Dennis, Mike

Journal:

Year:

2016

Language:

english

File:

PDF, 2.19 MB

english, 2016

41

7. CORRESPONDENCE

FORD, EDWARD B., BRODRICK, L., PLOWES, DARREL, PLOWES, DARREL, BERRY, G. F., GIBSON, P., GIBSON, P., CLARK, GOWAN C., HALE, P. E., BEVEN, G., WRIGHT, F. B., WARREN SMITH, E. W., RENNIE, FERGUS, ROBERT

Journal:

Ostrich / Journal of African Ornithology

Year:

1943

Language:

english

File:

PDF, 1.52 MB

english, 1943

42

Adult microbiota-deficient mice have distinct dendritic morphological changes: differential effects in the amygdala and hippocampus

Luczynski, Pauline, Whelan, Seán O., O'Sullivan, Colette, Clarke, Gerard, Shanahan, Fergus, Dinan, Timothy G., Cryan, John F., Gaspar, Patricia

Journal:

European Journal of Neuroscience

Year:

2016

Language:

english

File:

PDF, 1.24 MB

english, 2016

43

Doing Interdisciplinarity: Motivation and Collaboration in Research for Sustainable Agriculture in the UK

Frances Harris, Fergus Lyon and Sarah Clarke

Journal:

Year:

2009

Language:

english

File:

PDF, 1.32 MB

english, 2009

44

Environmental and genetic determinants of two vitamin D metabolites in healthy Australian children

Bima, Abdulhadi, Pezic, Angela, Sun, Cong, Cameron, Fergus J., Rodda, Christine, van der Mei, Ingrid, Chiaroni-Clarke, Rachel, Dwyer, Terence, Kemp, Andrew, Qu, Jun, Carlin, John, Ellis, Justine A., P

Journal:

Journal of Pediatric Endocrinology and Metabolism

Year:

2017

Language:

english

File:

PDF, 420 KB

english, 2017

45

Inosine can increase DNA's susceptibility to photo-oxidation by a Ru(II) complex due to structural change in the minor groove

Kelly, John M., Keane, Paraic, Hall, James, Poynton, Fergus, Poulsen, Bjorn, Gurung, Sarah, Clark, Ian, Sazanovich, Igor, Towrie, Michael, Gunnlaugsson, Thorfinnur, Quinn, Susan, Cardin, Christine

Journal:

Chemistry - A European Journal

Year:

2017

Language:

english

File:

PDF, 2.41 MB

english, 2017

46

Editorial

Coutts, Fergus, Clark, Louise

Journal:

Veterinary Anaesthesia and Analgesia

Year:

2018

Language:

english

File:

PDF, 157 KB

english, 2018

47

An audit of the dietary intake of Australian children with type 1 diabetes

Gilbertson, Heather R., Reed, Kristen, Clark, Sarah, Francis, Kate L., Cameron, Fergus J.

Journal:

Nutrition and Diabetes

Year:

2018

Language:

english

File:

PDF, 382 KB

english, 2018

48

Targeting the Microbiota to Address Diet-Induced Obesity: A Time Dependent Challenge

Clarke, Siobhan F., Murphy, Eileen F., O’Sullivan, Orla, Ross, R. Paul, O’Toole, Paul W., Shanahan, Fergus, Cotter, Paul D., Bereswill, Stefan

Journal:

Year:

2013

Language:

english

File:

PDF, 1.19 MB

english, 2013

49

Microbiota regulates visceral pain in the mouse

Luczynski, Pauline, Tramullas, Monica, Viola, Maria, Shanahan, Fergus, Clarke, Gerard, O'Mahony, Siobhain, Dinan, Timothy G, Cryan, John F

Journal:

Year:

2017

Language:

english

File:

PDF, 2.90 MB

english, 2017

50

Social interaction-induced activation of RNA splicing in the amygdala of microbiome-deficient mice

Stilling, Roman M, Moloney, Gerard M, Ryan, Feargal J, Hoban, Alan E, Bastiaanssen, Thomaz FS, Shanahan, Fergus, Clarke, Gerard, Claesson, Marcus J, Dinan, Timothy G, Cryan, John F

Journal:

Year:

2018

Language:

english

File:

PDF, 2.77 MB

english, 2018

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